Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9720_2862 | Not Available | Positive | 1465513 - 1467831 | 87108.3 |
| sigma-54 interaction domain protein | HMPREF9720_2863 | Not Available | Positive | 1467824 - 1469146 | 49691.2 |
| hypothetical protein | HMPREF9720_2864 | Not Available | Positive | 1469426 - 1469848 | 16091.5 |
| rtec protein | HMPREF9720_2865 | Not Available | Positive | 1470087 - 1470692 | 23243.2 |
| hypothetical protein | HMPREF9720_2866 | Not Available | Positive | 1470994 - 1472124 | 43083.9 |
| kap family p-loop domain protein | HMPREF9720_2867 | Not Available | Positive | 1472141 - 1475395 | 124234.0 |
| trag family protein | HMPREF9720_2868 | Not Available | Negative | 1475527 - 1477545 | 77090.4 |
| relaxase/mobilization nuclease domain protein | HMPREF9720_2869 | Not Available | Negative | 1477576 - 1478823 | 46565.8 |
| hypothetical protein | HMPREF9720_2870 | Not Available | Negative | 1478802 - 1479230 | 16824.5 |
| hypothetical protein | HMPREF9720_2871 | Not Available | Positive | 1479616 - 1480701 | 41069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
