Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2852 | Not Available | Positive | 1450775 - 1451137 | 13614.5 |
| dna binding domain, excisionase family | HMPREF9720_2853 | Not Available | Negative | 1451215 - 1451520 | 11724.1 |
| hypothetical protein | HMPREF9720_2854 | Not Available | Negative | 1451552 - 1451851 | 11590.3 |
| dna binding domain, excisionase family | HMPREF9720_2855 | Not Available | Positive | 1452005 - 1452415 | 15996.6 |
| hypothetical protein | HMPREF9720_2856 | Not Available | Positive | 1452419 - 1452769 | 13925.0 |
| hypothetical protein | HMPREF9720_2857 | Not Available | Positive | 1452790 - 1454361 | 59804.1 |
| dna topoisomerase | HMPREF9720_2858 | Not Available | Positive | 1454422 - 1456509 | 77608.9 |
| hypothetical protein | HMPREF9720_2859 | Not Available | Positive | 1456672 - 1457124 | 17330.1 |
| helicase c-terminal domain protein | HMPREF9720_2860 | Not Available | Positive | 1457114 - 1462930 | 219860.0 |
| putative translation elongation factor g | HMPREF9720_2861 | Not Available | Positive | 1463588 - 1465513 | 72226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
