Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine 5'-phosphate decarboxylase | HMPREF9720_2842 | Not Available | Negative | 1436413 - 1437120 | 26110.6 |
| dihydroorotate dehydrogenase 1b | HMPREF9720_2843 | Not Available | Negative | 1437135 - 1438094 | 34033.4 |
| oxidoreductase nad-binding domain protein | HMPREF9720_2844 | Not Available | Negative | 1438088 - 1438828 | 26393.0 |
| carbamoyl-phosphate synthase, large subunit | HMPREF9720_2845 | Not Available | Negative | 1438952 - 1442134 | 118291.0 |
| carbamoyl-phosphate synthase, small subunit | HMPREF9720_2846 | Not Available | Negative | 1442127 - 1443191 | 39567.3 |
| dihydroorotase | HMPREF9720_2847 | Not Available | Negative | 1443221 - 1444522 | 46634.9 |
| hypothetical protein | HMPREF9720_2848 | Not Available | Positive | 1445473 - 1446693 | 43809.8 |
| transcriptional regulator, deor family | HMPREF9720_2849 | Not Available | Negative | 1446796 - 1447707 | 33393.5 |
| transporter, major facilitator family protein | HMPREF9720_2850 | Not Available | Negative | 1447714 - 1449168 | 52271.1 |
| site-specific recombinase, phage integrase family | HMPREF9720_2851 | Not Available | Positive | 1449528 - 1450763 | 47891.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
