Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | HMPREF9720_2832 | Not Available | Negative | 1421720 - 1422187 | 15913.6 |
| putative alpha-1,2-mannosidase | HMPREF9720_2833 | Not Available | Negative | 1422501 - 1424831 | 87345.1 |
| putative alpha-1,2-mannosidase | HMPREF9720_2834 | Not Available | Negative | 1424847 - 1427090 | 83079.8 |
| f5/8 type c domain protein | HMPREF9720_2835 | Not Available | Negative | 1427095 - 1429290 | 82179.9 |
| putative alpha-1,2-mannosidase | HMPREF9720_2836 | Not Available | Negative | 1429291 - 1431558 | 85459.8 |
| hypothetical protein | HMPREF9720_2837 | Not Available | Negative | 1431561 - 1432571 | 37993.0 |
| transporter, major facilitator family protein | HMPREF9720_2838 | Not Available | Negative | 1432589 - 1433902 | 48435.3 |
| aspartate carbamoyltransferase | HMPREF9720_2839 | Not Available | Negative | 1434244 - 1435329 | 40855.1 |
| orotate phosphoribosyltransferase | HMPREF9720_2840 | Not Available | Negative | 1435481 - 1436113 | 22794.5 |
| glutaredoxin | HMPREF9720_2841 | Not Available | Negative | 1436130 - 1436390 | 10007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
