Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2802 | Not Available | Positive | 1384402 - 1384809 | 15147.1 |
| oligopeptide transporter, opt family | HMPREF9720_2803 | Not Available | Positive | 1384810 - 1386816 | 70171.4 |
| hypothetical protein | HMPREF9720_2804 | Not Available | Positive | 1386830 - 1387132 | 9997.1 |
| peptidase t | HMPREF9720_2805 | Not Available | Positive | 1387146 - 1388363 | 45079.0 |
| nad+ synthase | HMPREF9720_2806 | Not Available | Positive | 1388368 - 1390419 | 74925.5 |
| hypothetical protein | HMPREF9720_2807 | Not Available | Positive | 1390416 - 1391042 | 22335.9 |
| glu/leu/phe/val dehydrogenase, dimerization domain protein | HMPREF9720_2808 | Not Available | Positive | 1391281 - 1392636 | 49508.1 |
| hypothetical protein | HMPREF9720_2809 | Not Available | Negative | 1392704 - 1393309 | 21731.1 |
| rna polymerase sigma-54 factor | HMPREF9720_2810 | Not Available | Negative | 1393459 - 1394880 | 55108.0 |
| asparagine--trna ligase | HMPREF9720_2811 | Not Available | Negative | 1395066 - 1396454 | 52628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
