Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2315 | Not Available | Positive | 1373626 - 1374582 | 36662.3 |
| hypothetical protein | HMPREF9720_2316 | Not Available | Negative | 1374717 - 1374833 | 4570.73 |
| hypothetical protein | HMPREF9720_2317 | Not Available | Positive | 1375838 - 1376149 | 12073.6 |
| hypothetical protein | HMPREF9720_2318 | Not Available | Positive | 1376192 - 1376515 | 12529.9 |
| hypothetical protein | HMPREF9720_2319 | Not Available | Negative | 1377037 - 1377318 | 10631.0 |
| rna polymerase sigma factor, sigma-70 family | HMPREF9720_2320 | Not Available | Negative | 1377468 - 1378028 | 22198.6 |
| site-specific recombinase, phage integrase family | HMPREF9720_2321 | Not Available | Negative | 1378875 - 1380110 | 47515.8 |
| hypothetical protein | HMPREF9720_2322 | Not Available | Negative | 1381054 - 1382565 | 57515.8 |
| hypothetical protein | HMPREF9720_2800 | Not Available | Positive | 1382816 - 1383797 | 38025.7 |
| mazg nucleotide pyrophosphohydrolase domain protein | HMPREF9720_2801 | Not Available | Positive | 1384073 - 1384399 | 12424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
