Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2295 | Not Available | Negative | 1357975 - 1361304 | 123133.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_2296 | Not Available | Negative | 1361487 - 1362452 | 36313.8 |
| rna polymerase sigma-70 factor | HMPREF9720_2297 | Not Available | Positive | 1362630 - 1363205 | 22768.0 |
| transporter, major facilitator family protein | HMPREF9720_2298 | Not Available | Positive | 1363355 - 1364668 | 48039.3 |
| hypothetical protein | HMPREF9720_2299 | Not Available | Positive | 1364671 - 1365678 | 37863.9 |
| putative alpha-1,2-mannosidase | HMPREF9720_2300 | Not Available | Positive | 1365675 - 1367912 | 83699.7 |
| putative alpha-1,2-mannosidase | HMPREF9720_2301 | Not Available | Positive | 1367913 - 1371491 | 132609.0 |
| hypothetical protein | HMPREF9720_2302 | Not Available | Positive | 1371512 - 1372395 | 32934.6 |
| hypothetical protein | HMPREF9720_2329 | Not Available | Negative | 1372396 - 1372988 | 23361.2 |
| hypothetical protein | HMPREF9720_2314 | Not Available | Positive | 1373344 - 1373622 | 10768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
