Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_2357 | Not Available | Negative | 129633 - 129809 | 5957.19 |
| dhha1 domain protein | HMPREF9720_2360 | Not Available | Negative | 130230 - 131261 | 38250.8 |
| abc transporter, atp-binding protein | HMPREF9720_2361 | Not Available | Positive | 131455 - 133326 | 70868.4 |
| hypothetical protein | HMPREF9720_2362 | Not Available | Negative | 133617 - 134393 | 29277.3 |
| endonuclease iii | HMPREF9720_2363 | Not Available | Negative | 134428 - 135081 | 24211.4 |
| glycosyltransferase, group 2 family protein | HMPREF9720_2364 | Not Available | Negative | 135078 - 136022 | 36503.6 |
| uvrd/rep helicase | HMPREF9720_2365 | Not Available | Negative | 136025 - 138601 | 96762.1 |
| atpase family associated with various cellular activities (aaa) | HMPREF9720_2366 | Not Available | Positive | 138902 - 139945 | 38802.1 |
| hypothetical protein | HMPREF9720_2367 | Not Available | Positive | 139948 - 140832 | 33681.4 |
| hypothetical protein | HMPREF9720_2368 | Not Available | Positive | 140829 - 141809 | 36928.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
