Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | HMPREF9720_0448 | Not Available | Positive | 1334236 - 1335468 | 46328.2 |
| translation initiation factor if-2 | HMPREF9720_0449 | Not Available | Positive | 1335499 - 1338414 | 104215.0 |
| hypothetical protein | HMPREF9720_0450 | Not Available | Positive | 1338422 - 1339057 | 23693.6 |
| acetyl-coa hydrolase/transferase | HMPREF9720_0451 | Not Available | Positive | 1339082 - 1340401 | 47328.5 |
| type i phosphodiesterase / nucleotide pyrophosphatase | HMPREF9720_0452 | Not Available | Positive | 1340483 - 1341712 | 47114.0 |
| methyltransferase domain protein | HMPREF9720_0453 | Not Available | Positive | 1341816 - 1342538 | 27848.4 |
| fibrobacter succinogene major paralogous domain protein | HMPREF9720_0454 | Not Available | Positive | 1342983 - 1343957 | 36543.3 |
| hypothetical protein | HMPREF9720_0455 | Not Available | Positive | 1344368 - 1344739 | 14087.7 |
| hypothetical protein | HMPREF9720_0456 | Not Available | Positive | 1345117 - 1345257 | 5738.98 |
| hypothetical protein | HMPREF9720_0457 | Not Available | Positive | 1345502 - 1346347 | 30786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
