Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_0428 | Not Available | Negative | 1305661 - 1306881 | 43857.7 |
| rna polymerase sigma-70 factor | HMPREF9720_0429 | Not Available | Negative | 1306966 - 1307550 | 22952.0 |
| hypothetical protein | HMPREF9720_0431 | Not Available | Negative | 1307560 - 1307673 | 4519.63 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0430 | Not Available | Positive | 1307672 - 1308682 | 38260.7 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0432 | Not Available | Positive | 1308969 - 1312226 | 118681.0 |
| hypothetical protein | HMPREF9720_0433 | Not Available | Positive | 1312245 - 1313861 | 59175.0 |
| hypothetical protein | HMPREF9720_0434 | Not Available | Positive | 1313881 - 1314864 | 37183.6 |
| f5/8 type c domain protein | HMPREF9720_0435 | Not Available | Positive | 1314885 - 1317554 | 95037.1 |
| hypothetical protein | HMPREF9720_0436 | Not Available | Positive | 1317569 - 1318729 | 41723.1 |
| hypothetical protein | HMPREF9720_0437 | Not Available | Positive | 1318809 - 1319543 | 26836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
