Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0418 | Not Available | Negative | 1291043 - 1294360 | 122662.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0419 | Not Available | Negative | 1294537 - 1295472 | 35644.3 |
| rna polymerase sigma-70 factor | HMPREF9720_0421 | Not Available | Negative | 1295559 - 1296158 | 23272.2 |
| hypothetical protein | HMPREF9720_0420 | Not Available | Positive | 1296123 - 1296452 | 12465.1 |
| rna polymerase sigma-70 factor | HMPREF9720_0422 | Not Available | Positive | 1296449 - 1297159 | 27085.9 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_0423 | Not Available | Positive | 1297235 - 1298137 | 34395.3 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_0424 | Not Available | Positive | 1298308 - 1301661 | 123304.0 |
| hypothetical protein | HMPREF9720_0425 | Not Available | Positive | 1301679 - 1303268 | 58439.5 |
| hypothetical protein | HMPREF9720_0426 | Not Available | Positive | 1303297 - 1304388 | 40717.8 |
| hypothetical protein | HMPREF9720_0427 | Not Available | Positive | 1304418 - 1305584 | 42622.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
