Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase, phage integrase family | HMPREF9720_0360 | Not Available | Positive | 1272146 - 1273369 | 46744.0 |
| hypothetical protein | HMPREF9720_0361 | Not Available | Positive | 1273393 - 1273755 | 13835.6 |
| hypothetical protein | HMPREF9720_0362 | Not Available | Positive | 1273814 - 1273975 | 6363.88 |
| hypothetical protein | HMPREF9720_0363 | Not Available | Positive | 1274027 - 1275238 | 47614.2 |
| hypothetical protein | HMPREF9720_0364 | Not Available | Positive | 1275496 - 1276434 | 35534.8 |
| bacterial mobilization protein mobc | HMPREF9720_0365 | Not Available | Positive | 1276611 - 1276976 | 13955.8 |
| relaxase/mobilization nuclease domain protein | HMPREF9720_0366 | Not Available | Positive | 1276973 - 1277920 | 35742.0 |
| transcriptional regulator, arac family | HMPREF9720_0367 | Not Available | Negative | 1277942 - 1278547 | 23846.2 |
| hypothetical protein | HMPREF9720_0368 | Not Available | Positive | 1278664 - 1278813 | 5744.89 |
| transcriptional regulator, arac family | HMPREF9720_0369 | Not Available | Negative | 1278861 - 1279760 | 35622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
