Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | HMPREF9720_1947 | Not Available | Negative | 1256148 - 1257104 | 35888.9 |
| fad dependent oxidoreductase | HMPREF9720_1948 | Not Available | Negative | 1257146 - 1258519 | 49799.5 |
| transporter, major facilitator family protein | HMPREF9720_1949 | Not Available | Negative | 1258538 - 1259845 | 47857.9 |
| putative ribulokinase | HMPREF9720_1950 | Not Available | Negative | 1259862 - 1261529 | 59799.9 |
| hypothetical protein | HMPREF9720_1951 | Not Available | Negative | 1261861 - 1262028 | 6810.82 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_1952 | Not Available | Positive | 1262178 - 1265342 | 116959.0 |
| susd family protein | HMPREF9720_2167 | Not Available | Positive | 1265355 - 1267166 | 67685.4 |
| ser/thr phosphatase family protein | HMPREF9720_2168 | Not Available | Positive | 1267141 - 1268730 | 59524.3 |
| hypothetical protein | HMPREF9720_1955 | Not Available | Positive | 1268755 - 1270458 | 60976.2 |
| ap endonuclease, family 2 | HMPREF9720_1956 | Not Available | Positive | 1270537 - 1271625 | 39114.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
