Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis methyltransferase | HMPREF9720_1937 | Not Available | Negative | 1244514 - 1245230 | 27040.0 |
| efflux abc transporter, permease protein | HMPREF9720_1938 | Not Available | Negative | 1245227 - 1246471 | 45147.2 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF9720_1939 | Not Available | Positive | 1246548 - 1247297 | 26927.1 |
| putative neutral zinc metallopeptidase | HMPREF9720_1940 | Not Available | Positive | 1247301 - 1248068 | 27498.6 |
| hypothetical protein | HMPREF9720_1941 | Not Available | Positive | 1248076 - 1249683 | 58976.1 |
| mboat family protein | HMPREF9720_1942 | Not Available | Positive | 1249695 - 1251185 | 56613.1 |
| pap2 family protein | HMPREF9720_1943 | Not Available | Positive | 1251331 - 1251978 | 23683.4 |
| lysine--trna ligase | HMPREF9720_1944 | Not Available | Positive | 1252207 - 1253928 | 65642.7 |
| triose-phosphate isomerase | HMPREF9720_1945 | Not Available | Positive | 1253972 - 1254730 | 26868.1 |
| histidine acid phosphatase | HMPREF9720_1946 | Not Available | Negative | 1254822 - 1256132 | 50030.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
