Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1927 | Not Available | Positive | 1232568 - 1237370 | 172169.0 |
| outer membrane protein, omp85 family | HMPREF9720_1928 | Not Available | Positive | 1237354 - 1239657 | 86586.0 |
| Trna-ser | Not Available | Not Available | Positive | 1239815 - 1239905 | Not Available |
| putative dna metabolism protein | HMPREF9720_1930 | Not Available | Negative | 1239990 - 1240751 | 30087.0 |
| putative dna modification/repair radical sam protein | HMPREF9720_1931 | Not Available | Negative | 1240757 - 1242016 | 47967.9 |
| hypothetical protein | HMPREF9720_1932 | Not Available | Negative | 1242026 - 1242241 | 7839.55 |
| flavin reductase | HMPREF9720_1933 | Not Available | Negative | 1242220 - 1242831 | 21993.6 |
| hypothetical protein | HMPREF9720_1934 | Not Available | Negative | 1242980 - 1243219 | 8074.51 |
| hypothetical protein | HMPREF9720_1935 | Not Available | Negative | 1243325 - 1243795 | 17024.6 |
| hypothetical protein | HMPREF9720_1936 | Not Available | Negative | 1243795 - 1244511 | 25779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
