Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1917 | Not Available | Positive | 1225016 - 1226263 | 43872.8 |
| hypothetical protein | HMPREF9720_1918 | Not Available | Positive | 1226330 - 1226599 | 9621.93 |
| hypothetical protein | HMPREF9720_1919 | Not Available | Positive | 1226611 - 1226898 | 10857.1 |
| hypothetical protein | HMPREF9720_1920 | Not Available | Positive | 1226941 - 1227912 | 36238.3 |
| cytoplasmic alpha-amylase | HMPREF9720_1921 | Not Available | Positive | 1227979 - 1229466 | 56615.2 |
| hypothetical protein | HMPREF9720_1922 | Not Available | Positive | 1229653 - 1229862 | 7278.16 |
| tspo/mbr family protein | HMPREF9720_1923 | Not Available | Positive | 1230036 - 1230512 | 17561.1 |
| nitroreductase family protein | HMPREF9720_1924 | Not Available | Negative | 1230554 - 1231195 | 23687.0 |
| putative dna polymerase iv | HMPREF9720_1925 | Not Available | Positive | 1231286 - 1232362 | 40290.4 |
| hypothetical protein | HMPREF9720_1926 | Not Available | Positive | 1232314 - 1232541 | 8760.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
