Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_1907 | Not Available | Negative | 1215467 - 1216396 | 34841.2 |
| site-specific recombinase, phage integrase family | HMPREF9720_1908 | Not Available | Negative | 1216399 - 1217655 | 48111.8 |
| hypothetical protein | HMPREF9720_1909 | Not Available | Negative | 1217983 - 1218501 | 20173.0 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | HMPREF9720_1910 | Not Available | Positive | 1218676 - 1219776 | 40512.5 |
| pullulanase, type i | HMPREF9720_1911 | Not Available | Positive | 1219787 - 1221754 | 73516.0 |
| transglycosylase associated protein | HMPREF9720_1912 | Not Available | Positive | 1221826 - 1222086 | 9236.8 |
| hypothetical protein | HMPREF9720_1913 | Not Available | Positive | 1222089 - 1222403 | 11725.8 |
| hypothetical protein | HMPREF9720_1914 | Not Available | Negative | 1222465 - 1223151 | 26362.8 |
| hypothetical protein | HMPREF9720_1915 | Not Available | Negative | 1223254 - 1223688 | 15720.9 |
| membrane protein | HMPREF9720_1916 | Not Available | Negative | 1223807 - 1224661 | 31622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
