Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 region 2 | HMPREF9720_1897 | Not Available | Negative | 1202912 - 1203496 | 22580.3 |
| cation diffusion facilitator family transporter | HMPREF9720_1898 | Not Available | Negative | 1203836 - 1204753 | 32911.3 |
| proline--trna ligase | HMPREF9720_1899 | Not Available | Negative | 1204956 - 1206440 | 56439.5 |
| outer membrane protein transport protein, ompp1/fadl/todx family | HMPREF9720_1900 | Not Available | Negative | 1206537 - 1208264 | 63166.2 |
| hypothetical protein | HMPREF9720_1901 | Not Available | Negative | 1208285 - 1209442 | 41472.2 |
| Trna-ser | Not Available | Not Available | Positive | 1209716 - 1209802 | Not Available |
| hypothetical protein | HMPREF9720_1903 | Not Available | Negative | 1210463 - 1211287 | 31138.2 |
| hypothetical protein | HMPREF9720_1904 | Not Available | Negative | 1211352 - 1211999 | 25569.9 |
| vire n-terminal domain protein | HMPREF9720_1905 | Not Available | Negative | 1212501 - 1213433 | 34823.6 |
| phage/plasmid primase, p4 family domain protein | HMPREF9720_1906 | Not Available | Negative | 1213513 - 1214994 | 56645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
