Alistipes sp. HGB5

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. HGB5 is a Gram-negative bacterium characterized by the presence of flagella, which likely contribute to its motility. This organism is notable for having a single replicon, indicating a straightforward genomic structure that may have implications for its replication and genetic stability. The presence of flagella in Alistipes sp. HGB5 suggests adaptations for navigating its environment, which could be essential for nutrient acquisition and colonization within its ecological niche. This motility may also play a role in interactions with other microorganisms, potentially influencing community dynamics in its habitat. The genomic data for Alistipes sp. HGB5 can be accessed from the accession number AENZ00000000.1. This information provides a basis for further exploration of its genetic makeup and functional capabilities, which could reveal additional insights into its biology. Overall, the traits of Alistipes sp. HGB5 highlight its potential ecological role as a motile, Gram-negative bacterium that may contribute to microbial diversity and functionality in its environment. Understanding such traits can enhance our knowledge of microbial ecology and the specific roles different species play in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. HGB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. HGB5 contig00005, whole genome shotgun sequence.

Gene Summary

Adenine Count

740743 bp

Thymine Count

730936 bp

Guanine Count

993821 bp

Cytosine Count

999115 bp

Genome Length

3464615 bp

Protein-coding Genes

2946 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-70 region 2HMPREF9720_1897Not AvailableNegative1202912 - 120349622580.3
cation diffusion facilitator family transporterHMPREF9720_1898Not AvailableNegative1203836 - 120475332911.3
proline--trna ligaseHMPREF9720_1899Not AvailableNegative1204956 - 120644056439.5
outer membrane protein transport protein, ompp1/fadl/todx familyHMPREF9720_1900Not AvailableNegative1206537 - 120826463166.2
hypothetical proteinHMPREF9720_1901Not AvailableNegative1208285 - 120944241472.2
Trna-serNot AvailableNot AvailablePositive1209716 - 1209802Not Available
hypothetical proteinHMPREF9720_1903Not AvailableNegative1210463 - 121128731138.2
hypothetical proteinHMPREF9720_1904Not AvailableNegative1211352 - 121199925569.9
vire n-terminal domain proteinHMPREF9720_1905Not AvailableNegative1212501 - 121343334823.6
phage/plasmid primase, p4 family domain proteinHMPREF9720_1906Not AvailableNegative1213513 - 121499456645.2

Displaying genes 1061 – 1070 of 3009 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.