Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | HMPREF9720_1875 | Not Available | Negative | 1167931 - 1168104 | 6490.12 |
| dgqhr domain protein | HMPREF9720_2436 | Not Available | Positive | 1168386 - 1170440 | 79604.6 |
| hypothetical protein | HMPREF9720_2437 | Not Available | Positive | 1170598 - 1170756 | 5991.53 |
| hypothetical protein | HMPREF9720_2438 | Not Available | Negative | 1171030 - 1171308 | 10283.6 |
| kama family protein | HMPREF9720_2439 | Not Available | Positive | 1171463 - 1173559 | 80557.7 |
| hypothetical protein | HMPREF9720_2440 | Not Available | Positive | 1173577 - 1173735 | 5919.22 |
| hypothetical protein | HMPREF9720_2441 | Not Available | Positive | 1173681 - 1174832 | 41141.9 |
| pirin family protein | HMPREF9720_2442 | Not Available | Positive | 1174929 - 1175645 | 26437.2 |
| peptide chain release factor 3 | HMPREF9720_2443 | Not Available | Negative | 1175828 - 1177411 | 59012.6 |
| l-aspartate oxidase | HMPREF9720_2444 | Not Available | Negative | 1177476 - 1179035 | 58062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
