Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | HMPREF9720_2208 | Not Available | Positive | 1155274 - 1160526 | 193542.0 |
| transporter, major facilitator family protein | HMPREF9720_2209 | Not Available | Negative | 1160725 - 1161900 | 41702.0 |
| flavin reductase-like protein | HMPREF9720_2210 | Not Available | Negative | 1161897 - 1162916 | 35834.2 |
| putative esterase | HMPREF9720_2211 | Not Available | Negative | 1162925 - 1163743 | 30333.3 |
| phage integrase sam-like domain protein | HMPREF9720_2212 | Not Available | Positive | 1163796 - 1164698 | 34726.9 |
| ribosomal subunit interface protein | HMPREF9720_2213 | Not Available | Positive | 1164723 - 1165019 | 11257.5 |
| Trna-glu | Not Available | Not Available | Positive | 1165292 - 1165366 | Not Available |
| hypothetical protein | HMPREF9720_2215 | Not Available | Positive | 1165442 - 1166245 | 29523.0 |
| hypothetical protein | HMPREF9720_2216 | Not Available | Negative | 1166471 - 1166686 | 8593.75 |
| site-specific recombinase, phage integrase family | HMPREF9720_1874 | Not Available | Negative | 1166889 - 1167668 | 30122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
