Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase trimerization domain protein | HMPREF9720_2198 | Not Available | Negative | 1135754 - 1137733 | 73567.8 |
| beta galactosidase small chain | HMPREF9720_2199 | Not Available | Negative | 1137737 - 1138864 | 40780.1 |
| arylsulfatase | HMPREF9720_2200 | Not Available | Negative | 1139058 - 1140047 | 36987.0 |
| glycoside hydrolase, family 2 | HMPREF9720_2201 | Not Available | Positive | 1140180 - 1142852 | 100532.0 |
| arylsulfatase | HMPREF9720_2202 | Not Available | Positive | 1142849 - 1144399 | 58959.4 |
| beta galactosidase small chain | HMPREF9720_2203 | Not Available | Positive | 1144423 - 1147698 | 121360.0 |
| hypothetical protein | HMPREF9720_2204 | Not Available | Positive | 1148050 - 1150191 | 79448.8 |
| hypothetical protein | HMPREF9720_2205 | Not Available | Negative | 1150256 - 1152592 | 88787.6 |
| hypothetical protein | HMPREF9720_2206 | Not Available | Negative | 1152671 - 1152907 | 7785.52 |
| penicillin-binding protein 1c | HMPREF9720_2207 | Not Available | Negative | 1152925 - 1155234 | 85439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
