Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9720_3005 | Not Available | Negative | 1109567 - 1110688 | 41894.2 |
| hypothetical protein | HMPREF9720_3006 | Not Available | Negative | 1110717 - 1112243 | 56281.8 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_3007 | Not Available | Negative | 1112257 - 1115553 | 122129.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9720_3008 | Not Available | Negative | 1115730 - 1116698 | 36019.3 |
| rna polymerase sigma-70 factor | HMPREF9720_3009 | Not Available | Negative | 1116807 - 1117424 | 23788.9 |
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9720_3010 | Not Available | Negative | 1117433 - 1119736 | 84776.5 |
| putative signal peptidase ii | HMPREF9720_2445 | Not Available | Positive | 1120278 - 1121072 | 29828.0 |
| Trna-leu | Not Available | Not Available | Positive | 1121142 - 1121226 | Not Available |
| iscps8, transposase family protein | HMPREF9720_2447 | Not Available | Positive | 1121712 - 1122053 | 12696.3 |
| transposase, is116/is110/is902 family | HMPREF9720_2448 | Not Available | Positive | 1122162 - 1122599 | 16487.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
