Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. HGB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
740743 bp
Thymine Count
730936 bp
Guanine Count
993821 bp
Cytosine Count
999115 bp
Genome Length
3464615 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction modification dna specificity domain protein | HMPREF9720_2335 | Not Available | Negative | 100885 - 101890 | 37950.0 |
| hypothetical protein | HMPREF9720_2336 | Not Available | Negative | 101894 - 103666 | 67132.5 |
| death-on-curing family protein | HMPREF9720_2337 | Not Available | Negative | 103679 - 104152 | 18117.4 |
| hypothetical protein | HMPREF9720_2338 | Not Available | Negative | 104145 - 105161 | 39147.4 |
| n-6 dna methylase | HMPREF9720_2339 | Not Available | Negative | 105177 - 106685 | 57155.0 |
| helicase c-terminal domain protein | HMPREF9720_2340 | Not Available | Negative | 106688 - 109006 | 88098.6 |
| dna-binding helix-turn-helix protein | HMPREF9720_2341 | Not Available | Negative | 109016 - 109225 | 7628.17 |
| hypothetical protein | HMPREF9720_2342 | Not Available | Negative | 109323 - 109763 | 17812.1 |
| hypothetical protein | HMPREF9720_2343 | Not Available | Positive | 110448 - 110612 | 6320.53 |
| tonb-linked outer membrane protein, susc/raga family | HMPREF9720_2344 | Not Available | Positive | 111206 - 114157 | 109059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
