Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00959 | Not Available | Positive | 1218561 - 1219037 | 17766.2 |
| hypothetical protein | HMPREF9450_00960 | Not Available | Positive | 1219426 - 1220727 | 46763.1 |
| hypothetical protein | HMPREF9450_00961 | Not Available | Positive | 1220867 - 1221571 | 26011.4 |
| cysteine synthase a | HMPREF9450_00962 | Not Available | Negative | 1221876 - 1222823 | 33109.0 |
| hypothetical protein | HMPREF9450_00963 | Not Available | Negative | 1222933 - 1223328 | 14997.0 |
| dna polymerase iii, gamma and tau | HMPREF9450_00964 | Not Available | Negative | 1223691 - 1224803 | 40919.2 |
| hypothetical protein | HMPREF9450_00965 | Not Available | Negative | 1224905 - 1226845 | 72880.3 |
| hypothetical protein | HMPREF9450_00966 | Not Available | Negative | 1226971 - 1227789 | 30627.1 |
| hypothetical protein | HMPREF9450_00967 | Not Available | Negative | 1227816 - 1228817 | 39533.0 |
| hypothetical protein | HMPREF9450_00968 | Not Available | Negative | 1228826 - 1229260 | 16074.2 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
