Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1197812 - 1197893 | Not Available |
| ribonuclease r | HMPREF9450_00940 | Not Available | Negative | 1198285 - 1200498 | 83886.7 |
| hypothetical protein | HMPREF9450_00941 | Not Available | Negative | 1200594 - 1202939 | 89020.6 |
| hypothetical protein | HMPREF9450_00942 | Not Available | Negative | 1202984 - 1203424 | 16258.4 |
| hypothetical protein | HMPREF9450_00943 | Not Available | Negative | 1203483 - 1204229 | 28435.1 |
| diaminopimelate epimerase | HMPREF9450_00944 | Not Available | Positive | 1204466 - 1205269 | 28811.1 |
| hypothetical protein | HMPREF9450_00945 | Not Available | Positive | 1205385 - 1205708 | 12742.8 |
| hypothetical protein | HMPREF9450_00946 | Not Available | Positive | 1205780 - 1206580 | 29643.0 |
| hypothetical protein | HMPREF9450_00947 | Not Available | Negative | 1206652 - 1206912 | 9750.07 |
| hypothetical protein | HMPREF9450_00948 | Not Available | Negative | 1206869 - 1207099 | 8986.25 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
