Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | HMPREF9450_00931 | Not Available | Negative | 1185018 - 1189280 | 158182.0 |
| dna-directed rna polymerase subunit beta | HMPREF9450_00932 | Not Available | Negative | 1189429 - 1193193 | 140616.0 |
| 50s ribosomal protein l7/l12 | HMPREF9450_00933 | Not Available | Negative | 1193482 - 1193859 | 12810.3 |
| hypothetical protein | HMPREF9450_00934 | Not Available | Negative | 1193899 - 1194420 | 19019.2 |
| 50s ribosomal protein l1 | HMPREF9450_00935 | Not Available | Negative | 1194432 - 1195130 | 24985.7 |
| 50s ribosomal protein l11 | HMPREF9450_00936 | Not Available | Negative | 1195150 - 1195590 | 15579.1 |
| transcription termination/antitermination factor nusg | HMPREF9450_00937 | Not Available | Negative | 1195608 - 1196165 | 21102.3 |
| preprotein translocase, sece subunit | HMPREF9450_00938 | Not Available | Negative | 1196192 - 1196383 | 7183.07 |
| Trna-trp | Not Available | Not Available | Positive | 1196400 - 1196473 | Not Available |
| elongation factor tu | HMPREF9450_00939 | Not Available | Negative | 1196517 - 1197704 | 43509.5 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
