Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin | HMPREF9450_00921 | Not Available | Positive | 1170564 - 1172198 | 57616.7 |
| dna repair protein rada | HMPREF9450_00922 | Not Available | Negative | 1172570 - 1173940 | 49927.2 |
| hypothetical protein | HMPREF9450_00923 | Not Available | Negative | 1173933 - 1174961 | 37584.9 |
| hypothetical protein | HMPREF9450_00924 | Not Available | Negative | 1175034 - 1176365 | 49667.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HMPREF9450_00925 | Not Available | Negative | 1176396 - 1177595 | 43309.1 |
| hypothetical protein | HMPREF9450_00926 | Not Available | Negative | 1177599 - 1178480 | 32961.6 |
| hypothetical protein | HMPREF9450_00927 | Not Available | Positive | 1178785 - 1179681 | 33556.1 |
| hypothetical protein | HMPREF9450_00928 | Not Available | Positive | 1179718 - 1180773 | 38788.2 |
| hypothetical protein | HMPREF9450_00929 | Not Available | Positive | 1180806 - 1182125 | 46692.6 |
| hypothetical protein | HMPREF9450_00930 | Not Available | Positive | 1182407 - 1184863 | 91101.8 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
