Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uronate isomerase | HMPREF9450_00912 | Not Available | Positive | 1157305 - 1158708 | 52867.5 |
| hypothetical protein | HMPREF9450_00913 | Not Available | Positive | 1158825 - 1159865 | 37625.1 |
| hypothetical protein | HMPREF9450_00914 | Not Available | Positive | 1160036 - 1160707 | 23813.2 |
| hypothetical protein | HMPREF9450_00915 | Not Available | Positive | 1160803 - 1162230 | 51099.4 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 2 | HMPREF9450_00916 | Not Available | Positive | 1162254 - 1163174 | 34296.5 |
| hypothetical protein | HMPREF9450_00917 | Not Available | Positive | 1163529 - 1165052 | 55412.6 |
| Trna-his | Not Available | Not Available | Positive | 1165317 - 1165390 | Not Available |
| hypothetical protein | HMPREF9450_00918 | Not Available | Positive | 1165698 - 1167635 | 71766.0 |
| hypothetical protein | HMPREF9450_00919 | Not Available | Negative | 1167829 - 1169934 | 75992.3 |
| chaperonin | HMPREF9450_00920 | Not Available | Positive | 1170259 - 1170528 | 9433.7 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
