Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | HMPREF9450_00873 | Not Available | Negative | 1113512 - 1114468 | 35149.0 |
| hypothetical protein | HMPREF9450_00874 | Not Available | Positive | 1114641 - 1117202 | 94497.1 |
| hypothetical protein | HMPREF9450_00875 | Not Available | Positive | 1117346 - 1118755 | 51673.0 |
| Trna-arg | Not Available | Not Available | Positive | 1119049 - 1119125 | Not Available |
| hypothetical protein | HMPREF9450_00876 | Not Available | Negative | 1119391 - 1120065 | 25666.5 |
| hypothetical protein | HMPREF9450_00877 | Not Available | Positive | 1120175 - 1120348 | 6095.48 |
| hypothetical protein | HMPREF9450_00878 | Not Available | Positive | 1120506 - 1120955 | 17183.9 |
| hypothetical protein | HMPREF9450_00879 | Not Available | Positive | 1121311 - 1123080 | 67540.5 |
| hypothetical protein | HMPREF9450_00880 | Not Available | Positive | 1123537 - 1123836 | 11972.4 |
| hypothetical protein | HMPREF9450_00881 | Not Available | Positive | 1123836 - 1123967 | 4864.23 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
