Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | HMPREF9450_00078 | Not Available | Positive | 70141 - 70257 | 4548.93 |
| 30s ribosomal protein s13 | HMPREF9450_00079 | Not Available | Positive | 70294 - 70674 | 14166.3 |
| 30s ribosomal protein s11 | HMPREF9450_00080 | Not Available | Positive | 70687 - 71076 | 13762.7 |
| 30s ribosomal protein s4 | HMPREF9450_00081 | Not Available | Positive | 71302 - 71907 | 22778.6 |
| dna-directed rna polymerase subunit alpha | HMPREF9450_00082 | Not Available | Positive | 71970 - 72923 | 35640.9 |
| hypothetical protein | HMPREF9450_00083 | Not Available | Positive | 72943 - 73542 | 21163.6 |
| enolase | HMPREF9450_00084 | Not Available | Positive | 73996 - 75300 | 46312.0 |
| hypothetical protein | HMPREF9450_00085 | Not Available | Positive | 75868 - 76335 | 17829.8 |
| hypothetical protein | HMPREF9450_00086 | Not Available | Positive | 76557 - 79235 | 94022.1 |
| hypothetical protein | HMPREF9450_00087 | Not Available | Positive | 79484 - 80260 | 26125.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
