Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00864 | Not Available | Negative | 1103440 - 1104246 | 29037.3 |
| hypothetical protein | HMPREF9450_00865 | Not Available | Negative | 1104289 - 1104924 | 23295.8 |
| hypothetical protein | HMPREF9450_00866 | Not Available | Negative | 1105066 - 1105956 | 32783.9 |
| hypothetical protein | HMPREF9450_00867 | Not Available | Positive | 1106087 - 1106932 | 31964.0 |
| Trna-lys | Not Available | Not Available | Positive | 1107092 - 1107167 | Not Available |
| hypothetical protein | HMPREF9450_00868 | Not Available | Negative | 1107374 - 1108780 | 54314.9 |
| hypothetical protein | HMPREF9450_00869 | Not Available | Positive | 1109070 - 1110260 | 45598.5 |
| hypothetical protein | HMPREF9450_00870 | Not Available | Positive | 1110441 - 1110836 | 14282.1 |
| single-stranded-dna-specific exonuclease recj | HMPREF9450_00871 | Not Available | Negative | 1111040 - 1112818 | 66180.9 |
| lipoyl(octanoyl) transferase | HMPREF9450_00872 | Not Available | Negative | 1112827 - 1113501 | 25080.0 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
