Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00815 | Not Available | Positive | 1042664 - 1044226 | 58316.2 |
| hypothetical protein | HMPREF9450_00816 | Not Available | Positive | 1044364 - 1045749 | 50564.1 |
| hypothetical protein | HMPREF9450_00817 | Not Available | Positive | 1045951 - 1046421 | 17407.5 |
| hypothetical protein | HMPREF9450_00818 | Not Available | Positive | 1046630 - 1047547 | 33543.8 |
| hypothetical protein | HMPREF9450_00819 | Not Available | Positive | 1047654 - 1049135 | 55148.8 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | HMPREF9450_00820 | Not Available | Positive | 1049138 - 1049572 | 15556.7 |
| hypothetical protein | HMPREF9450_00821 | Not Available | Positive | 1049685 - 1050833 | 43127.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | HMPREF9450_00822 | Not Available | Positive | 1050833 - 1051381 | 19926.0 |
| hypothetical protein | HMPREF9450_00823 | Not Available | Positive | 1051566 - 1052150 | 22342.7 |
| hypothetical protein | HMPREF9450_00824 | Not Available | Negative | 1052299 - 1053312 | 37127.0 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
