Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00777 | Not Available | Positive | 989445 - 990053 | 23493.4 |
| hypothetical protein | HMPREF9450_00778 | Not Available | Positive | 990204 - 990791 | 21246.6 |
| hypothetical protein | HMPREF9450_00779 | Not Available | Negative | 990888 - 992759 | 70706.1 |
| excinuclease abc, c subunit | HMPREF9450_00780 | Not Available | Positive | 992847 - 994736 | 71878.1 |
| hypothetical protein | HMPREF9450_00781 | Not Available | Positive | 994819 - 995649 | 29820.0 |
| dihydroneopterin aldolase | HMPREF9450_00782 | Not Available | Positive | 995893 - 996219 | 11925.5 |
| hypothetical protein | HMPREF9450_00783 | Not Available | Positive | 996391 - 997461 | 39682.7 |
| hypothetical protein | HMPREF9450_00784 | Not Available | Positive | 997478 - 1000036 | 95695.0 |
| hypothetical protein | HMPREF9450_00785 | Not Available | Negative | 1000368 - 1000820 | 17160.4 |
| chaperone clpb | HMPREF9450_00786 | Not Available | Negative | 1001156 - 1003747 | 96930.2 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
