Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00738 | Not Available | Negative | 934319 - 935506 | 44445.8 |
| hypothetical protein | HMPREF9450_00739 | Not Available | Negative | 935696 - 936658 | 34564.6 |
| hypothetical protein | HMPREF9450_00740 | Not Available | Negative | 936871 - 938379 | 56687.4 |
| hypothetical protein | HMPREF9450_00741 | Not Available | Negative | 938458 - 939798 | 48718.9 |
| hypothetical protein | HMPREF9450_00742 | Not Available | Positive | 939995 - 940297 | 10888.1 |
| pyruvate:ferredoxin oxidoreductase | HMPREF9450_00743 | Not Available | Negative | 940565 - 944134 | 130020.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | HMPREF9450_00744 | Not Available | Positive | 944375 - 945091 | 27163.1 |
| elongation factor p 2 | HMPREF9450_00745 | Not Available | Negative | 945235 - 945801 | 21328.7 |
| hypothetical protein | HMPREF9450_00746 | Not Available | Negative | 946012 - 948309 | 87646.8 |
| phenylalanyl-trna synthetase subunit alpha | HMPREF9450_00747 | Not Available | Positive | 948476 - 949507 | 39119.0 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
