Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00729 | Not Available | Positive | 924030 - 924746 | 25823.7 |
| hypothetical protein | HMPREF9450_00730 | Not Available | Positive | 925030 - 925302 | 10043.2 |
| Trna-ser | Not Available | Not Available | Positive | 925381 - 925467 | Not Available |
| hypothetical protein | HMPREF9450_00731 | Not Available | Negative | 925560 - 926633 | 40607.7 |
| hypothetical protein | HMPREF9450_00732 | Not Available | Positive | 926847 - 927479 | 23350.5 |
| hypothetical protein | HMPREF9450_00733 | Not Available | Negative | 927592 - 927915 | 11499.8 |
| hypothetical protein | HMPREF9450_00734 | Not Available | Negative | 928063 - 930870 | 104022.0 |
| holliday junction atp-dependent dna helicase ruvb | HMPREF9450_00735 | Not Available | Negative | 930939 - 931943 | 36893.6 |
| hypothetical protein | HMPREF9450_00736 | Not Available | Negative | 931995 - 933584 | 57987.2 |
| hypothetical protein | HMPREF9450_00737 | Not Available | Negative | 933584 - 934195 | 23142.6 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
