Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | HMPREF9450_00700 | Not Available | Negative | 890209 - 890445 | 8409.84 |
| phosphoribosylglycinamide formyltransferase | HMPREF9450_00701 | Not Available | Positive | 890597 - 891166 | 20953.0 |
| hypothetical protein | HMPREF9450_00702 | Not Available | Positive | 891428 - 892150 | 26657.1 |
| hypothetical protein | HMPREF9450_00703 | Not Available | Positive | 892147 - 892539 | 14640.4 |
| hypothetical protein | HMPREF9450_00704 | Not Available | Negative | 892619 - 893221 | 22205.7 |
| hypothetical protein | HMPREF9450_00705 | Not Available | Negative | 893326 - 893598 | 9282.54 |
| Trna-ser | Not Available | Not Available | Positive | 893798 - 893882 | Not Available |
| hypothetical protein | HMPREF9450_00706 | Not Available | Positive | 894350 - 894946 | 22991.0 |
| hypothetical protein | HMPREF9450_00707 | Not Available | Positive | 895045 - 895560 | 19948.4 |
| hypothetical protein | HMPREF9450_00708 | Not Available | Negative | 895669 - 896343 | 25679.5 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
