Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00691 | Not Available | Positive | 881528 - 882445 | 33863.7 |
| hypothetical protein | HMPREF9450_00692 | Not Available | Positive | 882565 - 883353 | 29337.0 |
| hypothetical protein | HMPREF9450_00693 | Not Available | Positive | 883433 - 884551 | 40957.8 |
| hypothetical protein | HMPREF9450_00694 | Not Available | Positive | 884554 - 885666 | 41019.2 |
| Trna-gln | Not Available | Not Available | Positive | 885775 - 885848 | Not Available |
| hypothetical protein | HMPREF9450_00695 | Not Available | Negative | 885884 - 886597 | 25912.3 |
| hypothetical protein | HMPREF9450_00696 | Not Available | Positive | 886710 - 887192 | 18009.3 |
| hypothetical protein | HMPREF9450_00697 | Not Available | Negative | 887220 - 887891 | 24506.7 |
| ribonuclease iii | HMPREF9450_00698 | Not Available | Negative | 888124 - 888903 | 29298.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | HMPREF9450_00699 | Not Available | Negative | 888911 - 890158 | 44381.9 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
