Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | HMPREF9450_00632 | Not Available | Negative | 784088 - 784441 | 12774.6 |
| pantoate-beta-alanine ligase | HMPREF9450_00633 | Not Available | Negative | 784458 - 785306 | 30988.0 |
| hypothetical protein | HMPREF9450_00634 | Not Available | Positive | 785435 - 787480 | 77306.6 |
| hypothetical protein | HMPREF9450_00635 | Not Available | Positive | 787694 - 788692 | 36328.0 |
| hypothetical protein | HMPREF9450_00636 | Not Available | Negative | 788934 - 791069 | 79010.9 |
| hypothetical protein | HMPREF9450_00637 | Not Available | Negative | 791252 - 791857 | 22599.0 |
| orotate phosphoribosyltransferase | HMPREF9450_00638 | Not Available | Positive | 791867 - 792499 | 22824.4 |
| hypothetical protein | HMPREF9450_00639 | Not Available | Positive | 792590 - 793018 | 15776.3 |
| hypothetical protein | HMPREF9450_00640 | Not Available | Positive | 793237 - 793509 | 10102.1 |
| hypothetical protein | HMPREF9450_00641 | Not Available | Positive | 793617 - 794489 | 33885.8 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
