Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00535 | Not Available | Positive | 664383 - 666053 | 60875.2 |
| hypothetical protein | HMPREF9450_00536 | Not Available | Positive | 666234 - 667613 | 50931.3 |
| hypothetical protein | HMPREF9450_00537 | Not Available | Negative | 667644 - 668594 | 35608.7 |
| opt family oligopeptide transporter | HMPREF9450_00538 | Not Available | Positive | 668816 - 670813 | 70561.6 |
| peptidase t | HMPREF9450_00539 | Not Available | Positive | 670874 - 672112 | 45508.2 |
| hypothetical protein | HMPREF9450_00540 | Not Available | Negative | 672200 - 672733 | 19499.9 |
| hypothetical protein | HMPREF9450_00541 | Not Available | Negative | 672730 - 673671 | 34738.6 |
| hypothetical protein | HMPREF9450_00542 | Not Available | Positive | 673950 - 674378 | 16356.3 |
| Trna-met | Not Available | Not Available | Positive | 674601 - 674677 | Not Available |
| hypothetical protein | HMPREF9450_00543 | Not Available | Negative | 674836 - 675327 | 19335.8 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
