Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00485 | Not Available | Positive | 600199 - 602313 | 80347.5 |
| hypothetical protein | HMPREF9450_00486 | Not Available | Positive | 602350 - 603717 | 50369.1 |
| hypothetical protein | HMPREF9450_00487 | Not Available | Negative | 603693 - 603860 | 6359.9 |
| pyruvate, phosphate dikinase | HMPREF9450_00488 | Not Available | Negative | 603960 - 606686 | 100068.0 |
| hypothetical protein | HMPREF9450_00489 | Not Available | Negative | 606832 - 607905 | 40003.6 |
| dna gyrase, a subunit | HMPREF9450_00490 | Not Available | Positive | 608367 - 610931 | 95844.2 |
| hypothetical protein | HMPREF9450_00491 | Not Available | Positive | 610978 - 612288 | 47490.4 |
| hypothetical protein | HMPREF9450_00492 | Not Available | Positive | 612478 - 613923 | 53559.6 |
| atp-dependent transporter | HMPREF9450_00493 | Not Available | Positive | 613942 - 614691 | 27733.4 |
| hypothetical protein | HMPREF9450_00494 | Not Available | Positive | 614696 - 616003 | 47789.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
