Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00445 | Not Available | Negative | 556859 - 558268 | 52268.6 |
| hypothetical protein | HMPREF9450_00446 | Not Available | Negative | 558249 - 559004 | 27937.5 |
| hypothetical protein | HMPREF9450_00447 | Not Available | Negative | 559109 - 559303 | 7157.67 |
| hypothetical protein | HMPREF9450_00448 | Not Available | Positive | 559398 - 560846 | 54042.6 |
| threonine synthase | HMPREF9450_00449 | Not Available | Negative | 561004 - 562290 | 46835.8 |
| homoserine kinase | HMPREF9450_00450 | Not Available | Negative | 562321 - 563256 | 32671.0 |
| hypothetical protein | HMPREF9450_00451 | Not Available | Negative | 563411 - 563530 | 4230.99 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | HMPREF9450_00452 | Not Available | Negative | 563729 - 565261 | 57270.6 |
| hypothetical protein | HMPREF9450_00453 | Not Available | Negative | 565551 - 565844 | 11106.2 |
| hypothetical protein | HMPREF9450_00454 | Not Available | Negative | 565865 - 566152 | 10787.3 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
