Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00435 | Not Available | Positive | 548119 - 548328 | 8161.39 |
| hypothetical protein | HMPREF9450_00436 | Not Available | Negative | 548635 - 550299 | 63210.0 |
| hypothetical protein | HMPREF9450_00437 | Not Available | Negative | 550312 - 550620 | 11219.3 |
| hypothetical protein | HMPREF9450_00438 | Not Available | Positive | 550959 - 551864 | 32896.6 |
| 50s ribosomal protein l27 | HMPREF9450_00439 | Not Available | Negative | 552259 - 552516 | 9151.04 |
| 50s ribosomal protein l21 | HMPREF9450_00440 | Not Available | Negative | 552536 - 552847 | 11663.1 |
| hypothetical protein | HMPREF9450_00441 | Not Available | Positive | 553078 - 553383 | 11721.1 |
| hypothetical protein | HMPREF9450_00442 | Not Available | Positive | 553434 - 555017 | 58646.9 |
| 3',5'-bisphosphate nucleotidase | HMPREF9450_00443 | Not Available | Positive | 555058 - 555897 | 31889.9 |
| methylglyoxal synthase | HMPREF9450_00444 | Not Available | Positive | 556116 - 556595 | 17840.5 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
