Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00426 | Not Available | Positive | 537429 - 537554 | 4691.52 |
| atp-dependent clp protease atp-binding subunit clpx | HMPREF9450_00427 | Not Available | Negative | 537636 - 538898 | 47088.9 |
| atp-dependent clp protease proteolytic subunit | HMPREF9450_00428 | Not Available | Negative | 538976 - 539650 | 24735.9 |
| hypothetical protein | HMPREF9450_00429 | Not Available | Negative | 539750 - 540535 | 28859.8 |
| trigger factor tig | HMPREF9450_00430 | Not Available | Negative | 540732 - 542060 | 50806.8 |
| Trna-leu | Not Available | Not Available | Positive | 542133 - 542215 | Not Available |
| hypothetical protein | HMPREF9450_00431 | Not Available | Negative | 542356 - 543864 | 57720.5 |
| hypothetical protein | HMPREF9450_00432 | Not Available | Negative | 543958 - 545364 | 50807.3 |
| hypothetical protein | HMPREF9450_00433 | Not Available | Negative | 545394 - 546119 | 27334.3 |
| hypothetical protein | HMPREF9450_00434 | Not Available | Positive | 546286 - 547839 | 56178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
