Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00416 | Not Available | Positive | 528017 - 528586 | 20119.8 |
| hypothetical protein | HMPREF9450_00417 | Not Available | Negative | 528583 - 528831 | 9079.79 |
| hypothetical protein | HMPREF9450_00418 | Not Available | Negative | 528887 - 530065 | 41143.6 |
| hypothetical protein | HMPREF9450_00419 | Not Available | Negative | 530070 - 530510 | 15514.5 |
| hypothetical protein | HMPREF9450_00420 | Not Available | Negative | 530553 - 531533 | 35599.0 |
| hypothetical protein | HMPREF9450_00421 | Not Available | Negative | 531536 - 533098 | 56949.3 |
| methylmalonyl-coa epimerase | HMPREF9450_00422 | Not Available | Negative | 533131 - 533559 | 15273.5 |
| hypothetical protein | HMPREF9450_00423 | Not Available | Negative | 533686 - 535047 | 48620.8 |
| hypothetical protein | HMPREF9450_00424 | Not Available | Positive | 535364 - 535828 | 17083.8 |
| hypothetical protein | HMPREF9450_00425 | Not Available | Positive | 536062 - 537423 | 49190.9 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
