Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00386 | Not Available | Positive | 490539 - 492971 | 90768.4 |
| hypothetical protein | HMPREF9450_00387 | Not Available | Positive | 493099 - 493326 | 9183.78 |
| hypothetical protein | HMPREF9450_00388 | Not Available | Negative | 493504 - 494712 | 43042.0 |
| hypothetical protein | HMPREF9450_00389 | Not Available | Negative | 494882 - 495712 | 28884.1 |
| hypothetical protein | HMPREF9450_00390 | Not Available | Negative | 495914 - 496777 | 30325.1 |
| pyridoxal phosphate biosynthetic protein pdxa | HMPREF9450_00391 | Not Available | Positive | 496987 - 498081 | 38889.5 |
| threonyl-trna synthetase | HMPREF9450_00392 | Not Available | Positive | 498261 - 500204 | 73775.1 |
| translation initiation factor if-3 | HMPREF9450_00393 | Not Available | Positive | 500303 - 500827 | 19920.5 |
| hypothetical protein | HMPREF9450_00394 | Not Available | Positive | 501189 - 501809 | 21571.8 |
| hypothetical protein | HMPREF9450_00395 | Not Available | Positive | 501933 - 502307 | 14708.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
