Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine biosynthesis hisie | HMPREF9450_00366 | Not Available | Negative | 464645 - 465247 | 22398.8 |
| imidazole glycerol phosphate synthase subunit hisf | HMPREF9450_00367 | Not Available | Negative | 465344 - 466108 | 27272.7 |
| hypothetical protein | HMPREF9450_00368 | Not Available | Negative | 466148 - 466870 | 26061.4 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | HMPREF9450_00369 | Not Available | Negative | 466914 - 467621 | 25143.9 |
| histidine biosynthesis hisb | HMPREF9450_00370 | Not Available | Negative | 467660 - 468796 | 42266.6 |
| histidinol-phosphate aminotransferase | HMPREF9450_00371 | Not Available | Negative | 469018 - 470043 | 37929.6 |
| histidinol dehydrogenase | HMPREF9450_00372 | Not Available | Negative | 470217 - 471497 | 45693.9 |
| atp phosphoribosyltransferase | HMPREF9450_00373 | Not Available | Negative | 471497 - 472348 | 31199.1 |
| hypothetical protein | HMPREF9450_00374 | Not Available | Positive | 472861 - 473367 | 18036.0 |
| hypothetical protein | HMPREF9450_00375 | Not Available | Positive | 473479 - 474114 | 24270.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
