Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_00316 | Not Available | Positive | 393903 - 394442 | 19853.8 |
| hypothetical protein | HMPREF9450_00317 | Not Available | Positive | 394462 - 395043 | 21253.5 |
| hypothetical protein | HMPREF9450_00318 | Not Available | Negative | 395371 - 396861 | 55311.4 |
| arginyl-trna synthetase | HMPREF9450_00319 | Not Available | Negative | 397004 - 398842 | 68032.7 |
| hypothetical protein | HMPREF9450_00320 | Not Available | Positive | 399009 - 400031 | 38019.2 |
| hypothetical protein | HMPREF9450_00321 | Not Available | Negative | 400238 - 401248 | 35273.4 |
| hypothetical protein | HMPREF9450_00322 | Not Available | Negative | 401284 - 402405 | 39253.8 |
| hypothetical protein | HMPREF9450_00323 | Not Available | Negative | 402402 - 402803 | 15154.0 |
| hypothetical protein | HMPREF9450_00324 | Not Available | Negative | 402815 - 403870 | 38978.5 |
| hypothetical protein | HMPREF9450_00325 | Not Available | Positive | 405162 - 405686 | 19229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
