Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02334 | Not Available | Positive | 2836346 - 2837122 | 28115.3 |
| hypothetical protein | HMPREF9450_02335 | Not Available | Negative | 2837341 - 2838903 | 58176.1 |
| hypothetical protein | HMPREF9450_02336 | Not Available | Negative | 2838994 - 2840376 | 51347.7 |
| hypothetical protein | HMPREF9450_02337 | Not Available | Negative | 2840381 - 2843542 | 114842.0 |
| hypothetical protein | HMPREF9450_02338 | Not Available | Negative | 2843546 - 2844850 | 47431.2 |
| hypothetical protein | HMPREF9450_02339 | Not Available | Positive | 2845189 - 2845710 | 20330.8 |
| hypothetical protein | HMPREF9450_02340 | Not Available | Positive | 2845966 - 2846480 | 18655.4 |
| hypothetical protein | HMPREF9450_02341 | Not Available | Positive | 2846481 - 2846748 | 10083.2 |
| glucose-1-phosphate thymidylyltransferase | HMPREF9450_02342 | Not Available | Positive | 2846826 - 2847719 | 32468.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF9450_02343 | Not Available | Positive | 2847887 - 2848465 | 21926.8 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
