Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02315 | Not Available | Positive | 2813119 - 2813559 | 16378.3 |
| hypothetical protein | HMPREF9450_02316 | Not Available | Positive | 2813589 - 2813918 | 11774.5 |
| hypothetical protein | HMPREF9450_02317 | Not Available | Positive | 2814145 - 2814762 | 22853.4 |
| Trna-arg | Not Available | Not Available | Positive | 2814946 - 2815022 | Not Available |
| hypothetical protein | HMPREF9450_02318 | Not Available | Negative | 2815227 - 2816324 | 39970.9 |
| hypothetical protein | HMPREF9450_02319 | Not Available | Negative | 2816459 - 2817064 | 21551.4 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | HMPREF9450_02320 | Not Available | Negative | 2817118 - 2818167 | 36941.4 |
| pantetheine-phosphate adenylyltransferase | HMPREF9450_02321 | Not Available | Negative | 2818223 - 2818693 | 17948.8 |
| glycyl-trna synthetase | HMPREF9450_02322 | Not Available | Negative | 2818705 - 2820246 | 59608.2 |
| hypothetical protein | HMPREF9450_02323 | Not Available | Negative | 2820350 - 2821354 | 36944.9 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
