Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | YIT 12060 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
625577 bp
Thymine Count
664355 bp
Guanine Count
808831 bp
Cytosine Count
752215 bp
Genome Length
2850978 bp
Protein-coding Genes
2348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9450_02305 | Not Available | Positive | 2802676 - 2803605 | 33351.1 |
| asparaginyl-trna synthetase | HMPREF9450_02306 | Not Available | Positive | 2803788 - 2805185 | 52844.1 |
| rna polymerase sigma-54 factor | HMPREF9450_02307 | Not Available | Positive | 2805302 - 2806726 | 54786.5 |
| hypothetical protein | HMPREF9450_02308 | Not Available | Positive | 2806740 - 2807384 | 23271.1 |
| hypothetical protein | HMPREF9450_02309 | Not Available | Negative | 2807827 - 2808516 | 26330.2 |
| polypeptide deformylase | HMPREF9450_02310 | Not Available | Negative | 2808521 - 2809078 | 21224.5 |
| hypothetical protein | HMPREF9450_02311 | Not Available | Negative | 2809197 - 2809613 | 15568.1 |
| hypothetical protein | HMPREF9450_02312 | Not Available | Positive | 2809790 - 2810440 | 23117.8 |
| hypothetical protein | HMPREF9450_02313 | Not Available | Positive | 2810768 - 2811838 | 38443.6 |
| hypothetical protein | HMPREF9450_02314 | Not Available | Positive | 2811891 - 2813093 | 44412.9 |
Pathways
407 pathways
Health Effects
No health effects information available for this bacterium.
